The standard way of doing this is the oxford referencing guide.
http://guides.is.uwa.edu.au/cClick here for examples.php?g=325241&p=2177430
You put a number at the point of reference and then at the end of the document you have the all of full references documented by number.
A crude example:
The results of the trial[1]trial1 were disputed by a later report[2] which claimed that
Then at the end, under the title "References":
Full reference to the information on the trial.
Full reference to the information on the report.
etc...
In response to your edit, there is a less formal way of doing this where you would just write "see document x, section y". You sort of answered this yourself.